Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
UCEC rs73042869 chr6:170724887 G/T 6.43E-5 170 22.08 30.07 13.63 KM Plot
UCEC rs73042872 chr6:170724888 T/G 6.43E-5 170 22.08 30.07 13.63 KM Plot
UCEC rs73042883 chr6:170727158 T/C 7.64E-5 168 21.6 27.68 13.63 KM Plot
UCEC rs7305811 chr12:49306646 G/C 9.3E-6 170 11.37 22.97 22.75 KM Plot
UCEC rs7307336 chr12:33905105 G/A 0.000131 166 22.9 21.1 19.4 KM Plot
UCEC rs73101788 chr7:44419673 T/A 0 169 22.57 26.32 1.67 KM Plot
UCEC rs731946 chr10:135273309 G/C 8.11E-6 166 22.85 21.6 11.53 KM Plot
UCEC rs73281316 chr7:2061783 G/T 8.75E-9 172 22.38 22.97 4.5 KM Plot
UCEC rs73382539 chr9:835252 C/T 1.05E-8 170 22.67 19.1 4.5 KM Plot
UCEC rs73524581 chr16:30841980 A/C 8.43E-9 171 23.23 17.97 4.5 KM Plot
UCEC rs73524584 chr16:30842122 T/C 8.43E-9 171 23.23 17.97 4.5 KM Plot
UCEC rs73698903 chr7:64139947 C/T 0 174 22.57 21.98 2.4 KM Plot
UCEC rs73698904 chr7:64141921 C/T 0 174 22.57 21.98 2.4 KM Plot
UCEC rs73698907 chr7:64147748 G/A 0 174 22.57 21.98 2.4 KM Plot
UCEC rs73698964 chr7:64169731 C/T 0 174 22.57 21.98 2.4 KM Plot